Preparing TFBS search...
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https://www.genecascade.org/fabian/1650751034_19489
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PARM: compression zip
PARM: dbs_filter jaspar2022 cisbp_1.02 HOCOMOCOv11 hPDI jolma2013 SwissRegulon UniPROBE
PARM: filename VCF_Sample_File_WGS_GRCh37.zip
PARM: filter_homo_exac 10
PARM: filter_homo_gnomad 10
PARM: filter_homo_tgp 4
PARM: genome GRCh37/hg19
PARM: min_cov 10
PARM: mode vcf
PARM: models_filter tffm_d tffm_fo
PARM: regions_filter gene
PARM: regions_filter_genes_tb PKLR
PARM: tfs_filter known
Reading data from VCF file.
Genotype filter is on.
1:155259084-155271725
PKLR
Reading VCF
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4005110 variants skipped (reason: outside_region).
Compiling archive of skipped variants...
In total, 4005110 variants were skipped.
Download list.
13 remaining variants in VCF file.
/temp/QE/FABIAN/1650751034_19489/fabian.data
/temp/QE/FABIAN/1650751034_19489/transfer.vcf.fa
/fabian/status.cgi?id=1650751034_19489
hg19
{"prettyexample":"","min_cov":"10","search-tfs":"","regions_filter_genes_tb":"PKLR","mode":"vcf","tfs_filter_names_tb":"","filter_homo_gnomad":"10","compression":"zip","filter_homo_tgp":"4","filter_present_exac":"","genome":"hg19","email":"","tfs_filter":"known","filename":"/tmp/s1Bca3mL1o","filename_orig":"VCF_Sample_File_WGS_GRCh37.zip","filter_present_tgp":"","filter_homo_exac":"10","dbs_filter":"jaspar2022 cisbp_1.02 HOCOMOCOv11 hPDI jolma2013 SwissRegulon UniPROBE","regions_filter":"gene","regions_filter_include_tb":"","filter_present_gnomad":"","models_filter":"tffm_d tffm_fo"}