Preparing TFBS search... INFO: Depending on the number of variants and models, the search can take several minutes to complete. INFO: Your project has a unique URL. You can close the browser now and return to this URL later: INFO: https://www.genecascade.org/fabian/1650751034_19489 INFO: When your search results are available, this computation log will disappear. You can display it INFO: again by checking the "Options > Show log" checkbox on the top menu. INFO: Results are kept available on the server for 3 days after the analysis is complete, after which INFO: time they are automatically deleted. You can also manually delete your results. PARM: compression zip PARM: dbs_filter jaspar2022 cisbp_1.02 HOCOMOCOv11 hPDI jolma2013 SwissRegulon UniPROBE PARM: filename VCF_Sample_File_WGS_GRCh37.zip PARM: filter_homo_exac 10 PARM: filter_homo_gnomad 10 PARM: filter_homo_tgp 4 PARM: genome GRCh37/hg19 PARM: min_cov 10 PARM: mode vcf PARM: models_filter tffm_d tffm_fo PARM: regions_filter gene PARM: regions_filter_genes_tb PKLR PARM: tfs_filter known Reading data from VCF file. Genotype filter is on. 1:155259084-155271725 PKLR Reading VCF .................................................................................................... 10000 .................................................................................................... 20000 .................................................................................................... 30000 .................................................................................................... 40000 .................................................................................................... 50000 .................................................................................................... 60000 .................................................................................................... 70000 .................................................................................................... 80000 .................................................................................................... 90000 .................................................................................................... 100000 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 200000 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 300000 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 400000 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 500000 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 600000 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 700000 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 800000 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 900000 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 1000000 ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; 2000000 ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; 3000000 ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; 4000000 4005110 variants skipped (reason: outside_region). Compiling archive of skipped variants... In total, 4005110 variants were skipped. Download list. 13 remaining variants in VCF file.
Back to the table
Download these results Print this page
hg19
{"regions_filter_genes_tb":"PKLR","tfs_filter_names_tb":"","models_filter":"tffm_d tffm_fo","email":"","regions_filter":"gene","filter_present_tgp":"","genome":"hg19","prettyexample":"","tfs_filter":"known","dbs_filter":"jaspar2022 cisbp_1.02 HOCOMOCOv11 hPDI jolma2013 SwissRegulon UniPROBE","filename":"/tmp/s1Bca3mL1o","filter_homo_gnomad":"10","mode":"vcf","compression":"zip","filter_present_exac":"","filter_homo_exac":"10","filter_homo_tgp":"4","min_cov":"10","regions_filter_include_tb":"","search-tfs":"","filename_orig":"VCF_Sample_File_WGS_GRCh37.zip","filter_present_gnomad":""}