Yum, tasty mutations...

MutationT@ster 2025

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Input seems to be ok - now mapping the variant to the different transcripts...
Querying Taster for transcript #1: ENST00000292427
Querying Taster for transcript #2: ENST00000517471
Querying Taster for transcript #3: ENST00000377675
MT speed 0.1 s - this script 2.525222 s

Transcript summary:

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Yum, tasty mutations...

MutationT@ster 2025

Variant:

8:142876849A>T_2_ENST00000517471

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Prediction:

DeleteriousPermalink

Summary:

  • Model: simple_aae
  • Tree vote: 91|9 (del | benign) ?
Analysed issue Analysis result
Variant Chr8:142876849A>T (GRCh38)
Gene symbol CYP11B1
Gene constraints LOEUF: 0.95, LOF (oe): 0.70, misssense (oe): 1.02, synonymous (oe): 1.04 ? (gnomAD)
Ensembl transcript ID ENST00000517471.5
Genbank transcript ID NM_001026213 (by similarity)
UniProt / AlphaMissense peptide C11B1_HUMAN | AlphaMissense: transcript, gene
Variant type Single base exchange
Gene region CDS
DNA changes c.632T>A
g.2998T>A
AA changes
AAE:L211Q?
Score:113
Frameshift No
Length of protein Normal
Pathogenic variant (ClinVar) Variant not listed in ClinVar as (likely) pathogenic.
Variant DBs
dbSNP IDrs368125568
gnomADhomozygous (T/T)heterozygousallele carriers
01717
Protein conservation
SpeciesMatchGeneAAAlignment
Human      211SNLALFGERLGLVGHSPSSASLNF
mutated  not conserved    211SNLALFGERLGQVGHSPSSASLN
Ptroglodytes  no homologue    
Mmulatta  no homologue    
Fcatus  no homologue    
Mmusculus  no homologue    
Ggallus  no homologue    
Trubripes  no homologue    
Drerio  no homologue    
Dmelanogaster  no homologue    
Celegans  no homologue    
Xtropicalis  no homologue    
Protein features
Start (aa)End (aa)FeatureDetails 
25503CHAINlost
Phylogenetic conservation
PhyloPPhastCons
(flanking)-1.3420
5.8790.994
(flanking)1.8370.987
?
Splice sites No abrogation of potential splice sites predicted by MaxEntScan.
Distance from splice site N/A
Kozak consensus sequence altered? No
poly(A) signal N/A
AA sequence altered Yes
Chromosome 8
Strand -1
Original gDNA sequence snippet TTTTGGAGAGCGGCTGGGCCTGGTTGGCCACAGCCCCAGTT
Altered gDNA sequence snippet TTTTGGAGAGCGGCTGGGCCAGGTTGGCCACAGCCCCAGTT
Original cDNA sequence snippet TTTTGGAGAGCGGCTGGGCCTGGTTGGCCACAGCCCCAGTT
Altered cDNA sequence snippet TTTTGGAGAGCGGCTGGGCCAGGTTGGCCACAGCCCCAGTT
Wildtype AA sequence MALRAKAEVC MAVPWLSLQR AQALGTRAAR VPRTVLPFEA MPRRPGNRWL RLLQIWREQG
YEDLHLEVHQ TFQELGPIFR YDLGGAGMVC VMLPEDVEKL QQVDSLHPHR MSLEPWVAYR
QHRGHKCGVF LLNGPEWRFN RLRLNPEVLS PNAVQRFLPM VDAVARDFSQ ALKKKVLQNA
RGSLTLDVQP SIFHYTIEAS NLALFGERLG LVGHSPSSAS LNFLHALEVM FKSTVQLMFM
PRSLSRWTSP KVWKEHFEAW DCIFQYGDNC IQKIYQELAF SRPQQYTSIV AELLLNAELS
PDAIKANSME LTAGSVDTTV FPLLMTLFEL ARNPNVQQAL RQESLAAAAS ISEHPQKATT
ELPLLRAALK ETLRLYPVGL FLERVASSDL VLQNYHIPAG VLKHLQVETL TQEDIKMVYS
FILRPSMFPL LTFRAIN*
Mutated AA sequence MALRAKAEVC MAVPWLSLQR AQALGTRAAR VPRTVLPFEA MPRRPGNRWL RLLQIWREQG
YEDLHLEVHQ TFQELGPIFR YDLGGAGMVC VMLPEDVEKL QQVDSLHPHR MSLEPWVAYR
QHRGHKCGVF LLNGPEWRFN RLRLNPEVLS PNAVQRFLPM VDAVARDFSQ ALKKKVLQNA
RGSLTLDVQP SIFHYTIEAS NLALFGERLG QVGHSPSSAS LNFLHALEVM FKSTVQLMFM
PRSLSRWTSP KVWKEHFEAW DCIFQYGDNC IQKIYQELAF SRPQQYTSIV AELLLNAELS
PDAIKANSME LTAGSVDTTV FPLLMTLFEL ARNPNVQQAL RQESLAAAAS ISEHPQKATT
ELPLLRAALK ETLRLYPVGL FLERVASSDL VLQNYHIPAG VLKHLQVETL TQEDIKMVYS
FILRPSMFPL LTFRAIN*
Position of stopcodon in wt / mu CDS 1314 / 1314
Position (AA) of stopcodon in wt / mu AA sequence 438 / 438
Position of stopcodon in wt / mu cDNA 1325 / 1325
Position of start ATG in wt / mu cDNA 12 / 12
Last intron/exon boundary 1211
Theoretical NMD boundary in CDS 1149
Length of CDS 1314
Coding sequence (CDS) position 632
cDNA position 643
gDNA position 2998
Chromosomal position 142876849
Speed 0.03 s

All positions are in basepairs (bp) if not explicitly stated differently. cDNA/gDNA/chromosomal position: Ins/del are shown as 'last normal base / first normal base'.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project

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Yum, tasty mutations...

MutationT@ster 2025

Variant:

8:142876849A>T_3_ENST00000377675

Back to summary table

Prediction:

DeleteriousPermalink

Summary:

  • Model: simple_aae
  • Tree vote: 92|8 (del | benign) ?
Analysed issue Analysis result
Variant Chr8:142876849A>T (GRCh38)
Gene symbol CYP11B1
Gene constraints LOEUF: 0.98, LOF (oe): 0.77, misssense (oe): 1.04, synonymous (oe): 1.10 ? (gnomAD)
Ensembl transcript ID ENST00000377675.3
Genbank transcript ID
UniProt / AlphaMissense peptide N/A
Variant type Single base exchange
Gene region CDS
DNA changes c.845T>A
g.2998T>A
AA changes
AAE:L282Q?
Score:113
Frameshift No
Length of protein Normal
Pathogenic variant (ClinVar) Variant not listed in ClinVar as (likely) pathogenic.
Variant DBs
dbSNP IDrs368125568
gnomADhomozygous (T/T)heterozygousallele carriers
01717
Protein conservation
SpeciesMatchGeneAAAlignment
Human      282SNLALFGERLGLVGHSPSSASLNF
mutated  not conserved    282SNLALFGERLGQVGHSPSSASLN
Ptroglodytes  no homologue    
Mmulatta  no homologue    
Fcatus  no homologue    
Mmusculus  no homologue    
Ggallus  no homologue    
Trubripes  no homologue    
Drerio  no homologue    
Dmelanogaster  no homologue    
Celegans  no homologue    
Xtropicalis  no homologue    
Protein features N/A
Phylogenetic conservation
PhyloPPhastCons
(flanking)-1.3420
5.8790.994
(flanking)1.8370.987
?
Splice sites No abrogation of potential splice sites predicted by MaxEntScan.
Distance from splice site N/A
Kozak consensus sequence altered? No
poly(A) signal N/A
AA sequence altered Yes
Chromosome 8
Strand -1
Original gDNA sequence snippet TTTTGGAGAGCGGCTGGGCCTGGTTGGCCACAGCCCCAGTT
Altered gDNA sequence snippet TTTTGGAGAGCGGCTGGGCCAGGTTGGCCACAGCCCCAGTT
Original cDNA sequence snippet TTTTGGAGAGCGGCTGGGCCTGGTTGGCCACAGCCCCAGTT
Altered cDNA sequence snippet TTTTGGAGAGCGGCTGGGCCAGGTTGGCCACAGCCCCAGTT
Wildtype AA sequence MALRAKAEVC MAVPWLSLQR AQALGTRAAR VPRTVLPFEA MPRRPGNRWL RLLQIWREQG
YEDLHLEVHQ TFQELGPIFR SRHSASFGRW GRSAARAGLW RCQGRGWCRA NPSSLQRGQD
SEALKYDLGG AGMVCVMLPE DVEKLQQVDS LHPHRMSLEP WVAYRQHRGH KCGVFLLNVA
DRGNSSPPFP GGIHGAPTHS GCRNGPEWRF NRLRLNPEVL SPNAVQRFLP MVDAVARDFS
QALKKKVLQN ARGSLTLDVQ PSIFHYTIEA SNLALFGERL GLVGHSPSSA SLNFLHALEV
MFKSTVQLMF MPRSLSRWTS PKVWKEHFEA WDCIFQYGDN CIQKIYQELA FSRPQQYTSI
VAELLLNAEL SPDAIKANSM ELTAGSVDTT VFPLLMTLFE LARNPNVQQA LRQESLAAAA
SISEHPQKAT TELPLLRAAL KETLRLYPVG LFLERVASSD LVLQNYHIPA GTLVRVFLYS
LGRNPALFPR PERYNPQRWL DIRGSGRNFY HVPFGFGMRQ CLGRRLAEAE MLLLLHHVLK
HLQVETLTQE DIKMVYSFIL RPSMFPLLTF RAIN*
Mutated AA sequence MALRAKAEVC MAVPWLSLQR AQALGTRAAR VPRTVLPFEA MPRRPGNRWL RLLQIWREQG
YEDLHLEVHQ TFQELGPIFR SRHSASFGRW GRSAARAGLW RCQGRGWCRA NPSSLQRGQD
SEALKYDLGG AGMVCVMLPE DVEKLQQVDS LHPHRMSLEP WVAYRQHRGH KCGVFLLNVA
DRGNSSPPFP GGIHGAPTHS GCRNGPEWRF NRLRLNPEVL SPNAVQRFLP MVDAVARDFS
QALKKKVLQN ARGSLTLDVQ PSIFHYTIEA SNLALFGERL GQVGHSPSSA SLNFLHALEV
MFKSTVQLMF MPRSLSRWTS PKVWKEHFEA WDCIFQYGDN CIQKIYQELA FSRPQQYTSI
VAELLLNAEL SPDAIKANSM ELTAGSVDTT VFPLLMTLFE LARNPNVQQA LRQESLAAAA
SISEHPQKAT TELPLLRAAL KETLRLYPVG LFLERVASSD LVLQNYHIPA GTLVRVFLYS
LGRNPALFPR PERYNPQRWL DIRGSGRNFY HVPFGFGMRQ CLGRRLAEAE MLLLLHHVLK
HLQVETLTQE DIKMVYSFIL RPSMFPLLTF RAIN*
Position of stopcodon in wt / mu CDS 1725 / 1725
Position (AA) of stopcodon in wt / mu AA sequence 575 / 575
Position of stopcodon in wt / mu cDNA 1732 / 1732
Position of start ATG in wt / mu cDNA 8 / 8
Last intron/exon boundary 1618
Theoretical NMD boundary in CDS 1560
Length of CDS 1725
Coding sequence (CDS) position 845
cDNA position 852
gDNA position 2998
Chromosomal position 142876849
Speed 0.02 s

All positions are in basepairs (bp) if not explicitly stated differently. cDNA/gDNA/chromosomal position: Ins/del are shown as 'last normal base / first normal base'.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project

Back to summary table

Yum, tasty mutations...

MutationT@ster 2025

Variant:

8:142876849A>T_1_ENST00000292427

Back to summary table

Prediction:

DeleteriousPermalink

Summary:

  • Model: simple_aae
  • Tree vote: 94|6 (del | benign) ?
Analysed issue Analysis result
Variant Chr8:142876849A>T (GRCh38)
Gene symbol CYP11B1
Gene constraints LOEUF: 0.92, LOF (oe): 0.69, misssense (oe): 1.03, synonymous (oe): 1.07 ? (gnomAD)
Ensembl transcript ID ENST00000292427.10
Genbank transcript ID NM_000497 (exact from MANE)
UniProt / AlphaMissense peptide C11B1_HUMAN | AlphaMissense: transcript, gene
Variant type Single base exchange
Gene region CDS
DNA changes c.632T>A
g.2998T>A
AA changes
AAE:L211Q?
Score:113
Frameshift No
Length of protein Normal
Pathogenic variant (ClinVar) Variant not listed in ClinVar as (likely) pathogenic.
Variant DBs
dbSNP IDrs368125568
gnomADhomozygous (T/T)heterozygousallele carriers
01717
Protein conservation
SpeciesMatchGeneAAAlignment
Human      211SNLALFGERLGLVGHSPSSASLNF
mutated  not conserved    211SNLALFGERLGQVGHSPSSASLN
Ptroglodytes  all identical    285SNLALFGERLGLVGHSPSSASLN
Mmulatta  all identical    712SNLALFGERLGLVGHSPSSASLS
Fcatus  all identical    211SNLALFGERLGLLGHSPSPASLN
Mmusculus  no homologue    
Ggallus  no homologue    
Trubripes  no homologue    
Drerio  no homologue    
Dmelanogaster  no homologue    
Celegans  no homologue    
Xtropicalis  no homologue    
Protein features
Start (aa)End (aa)FeatureDetails 
25503CHAINlost
Phylogenetic conservation
PhyloPPhastCons
(flanking)-1.3420
5.8790.994
(flanking)1.8370.987
?
Splice sites No abrogation of potential splice sites predicted by MaxEntScan.
Distance from splice site N/A
Kozak consensus sequence altered? No
poly(A) signal N/A
AA sequence altered Yes
Chromosome 8
Strand -1
Original gDNA sequence snippet TTTTGGAGAGCGGCTGGGCCTGGTTGGCCACAGCCCCAGTT
Altered gDNA sequence snippet TTTTGGAGAGCGGCTGGGCCAGGTTGGCCACAGCCCCAGTT
Original cDNA sequence snippet TTTTGGAGAGCGGCTGGGCCTGGTTGGCCACAGCCCCAGTT
Altered cDNA sequence snippet TTTTGGAGAGCGGCTGGGCCAGGTTGGCCACAGCCCCAGTT
Wildtype AA sequence MALRAKAEVC MAVPWLSLQR AQALGTRAAR VPRTVLPFEA MPRRPGNRWL RLLQIWREQG
YEDLHLEVHQ TFQELGPIFR YDLGGAGMVC VMLPEDVEKL QQVDSLHPHR MSLEPWVAYR
QHRGHKCGVF LLNGPEWRFN RLRLNPEVLS PNAVQRFLPM VDAVARDFSQ ALKKKVLQNA
RGSLTLDVQP SIFHYTIEAS NLALFGERLG LVGHSPSSAS LNFLHALEVM FKSTVQLMFM
PRSLSRWTSP KVWKEHFEAW DCIFQYGDNC IQKIYQELAF SRPQQYTSIV AELLLNAELS
PDAIKANSME LTAGSVDTTV FPLLMTLFEL ARNPNVQQAL RQESLAAAAS ISEHPQKATT
ELPLLRAALK ETLRLYPVGL FLERVASSDL VLQNYHIPAG TLVRVFLYSL GRNPALFPRP
ERYNPQRWLD IRGSGRNFYH VPFGFGMRQC LGRRLAEAEM LLLLHHVLKH LQVETLTQED
IKMVYSFILR PSMFPLLTFR AIN*
Mutated AA sequence MALRAKAEVC MAVPWLSLQR AQALGTRAAR VPRTVLPFEA MPRRPGNRWL RLLQIWREQG
YEDLHLEVHQ TFQELGPIFR YDLGGAGMVC VMLPEDVEKL QQVDSLHPHR MSLEPWVAYR
QHRGHKCGVF LLNGPEWRFN RLRLNPEVLS PNAVQRFLPM VDAVARDFSQ ALKKKVLQNA
RGSLTLDVQP SIFHYTIEAS NLALFGERLG QVGHSPSSAS LNFLHALEVM FKSTVQLMFM
PRSLSRWTSP KVWKEHFEAW DCIFQYGDNC IQKIYQELAF SRPQQYTSIV AELLLNAELS
PDAIKANSME LTAGSVDTTV FPLLMTLFEL ARNPNVQQAL RQESLAAAAS ISEHPQKATT
ELPLLRAALK ETLRLYPVGL FLERVASSDL VLQNYHIPAG TLVRVFLYSL GRNPALFPRP
ERYNPQRWLD IRGSGRNFYH VPFGFGMRQC LGRRLAEAEM LLLLHHVLKH LQVETLTQED
IKMVYSFILR PSMFPLLTFR AIN*
Position of stopcodon in wt / mu CDS 1512 / 1512
Position (AA) of stopcodon in wt / mu AA sequence 504 / 504
Position of stopcodon in wt / mu cDNA 1524 / 1524
Position of start ATG in wt / mu cDNA 13 / 13
Last intron/exon boundary 1410
Theoretical NMD boundary in CDS 1347
Length of CDS 1512
Coding sequence (CDS) position 632
cDNA position 644
gDNA position 2998
Chromosomal position 142876849
Speed 0.05 s

All positions are in basepairs (bp) if not explicitly stated differently. cDNA/gDNA/chromosomal position: Ins/del are shown as 'last normal base / first normal base'.
AA/aa: amino acid; CDS: coding sequence; mu: mutated; NMD: nonsense-mediated mRNA decay; nt: nucleotide; wt: wildtype; TGP: 1000 Genomes Project

Back to summary table